Data

Publicly available datasets from our papers.

  • HHIP protein interactions in lung cells provide insight into COPD pathogenesis, Human Molecular Genetics 2025 (GSE285360)
  • Cigarette Smoking-Associated Isoform Switching and 3’ UTR Lengthening Via Alternative Polyadenylation, Genomics 2021 (GSE171730)
  • Improved Prediction of Smoking Status via Isoform-Aware RNA-seq Deep Learning Models, PLoS Comp Bio 2021 (GSE158699)
  • Fine Mapping and Functional Characterization of Genetic Variants in the FAM13A Chronic Obstructive Pulmonary Disease GWAS locus using Massively Parallel Reporter Assays, AJRCCM 2019 (GSE109452)
  • Whole blood RNA sequencing of current and former cigarette smokers, BMC Med Genomics 2017 (GSE97531)
  • Complex Disease Subtypes Identified by Network-Based Clustering of Gene Expression Data: Application to COPD, Genomics 2016 (GSE76705)

Interactive apps with searchable results

  • Overlap between COPD genetic association results and transcriptional quantitative trait loci, HGG Advances 2025 (link)
  • Identification of an emphysema- associated genetic variant near TGFB2 with regulatory effects in lung fibroblasts, eLife 2019 (Colocalization results)
  • Integrative genomics analysis identifies ACVR1B as a candidate causal gene of emphysema distribution in non-alpha 1-antitrypsin deficient smokers, AJRCMB 2019